vvsandClaude Opus 5
9c1638af07
make_open_package.py builds the archive from HEAD - source (git archive, LF line ends), the full history (git bundle), both simbracket wheels, README, requirements, reproduce.sh, LICENSE, NOTICE, SHA256SUMS - and refuses if any commit of the branch carries a string from a private list kept outside the repository, or if a text file has CRLF line ends; cleanroom_check.sh verifies the archive on Linux. Appendix D states that the history was rewritten once before publication to remove a server address, and that Table D1 is recomputed from the published history. lib/LICENSE so the wheels carry the licence. Server: verify 548 OK / 0 BAD, regression x2 1239 passed, PDF 32 pages, 0 errors, 0 overfull. Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
35 lines
1.8 KiB
Bash
35 lines
1.8 KiB
Bash
#!/bin/bash
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# Clean-room check of the Zenodo archive on Linux: unzip into an empty directory, install only the
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# simbracket wheel from the archive (dependencies from the existing environment, nothing downloaded),
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# run the verifier and the equivalence test from source/, and recompute Appendix D from the bundled
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# history. Usage: cleanroom_check.sh <zip>
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set -e
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export OMP_NUM_THREADS=1 OPENBLAS_NUM_THREADS=1 MKL_NUM_THREADS=1
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PY=~/torchenv/bin/python
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Z=$(readlink -f "$1")
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R=~/zenodo_cleanroom
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rm -rf $R && mkdir -p $R && cd $R
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$PY -c "import zipfile,sys; zipfile.ZipFile(sys.argv[1]).extractall('.')" "$Z"
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D=$(ls -d sim-numerics-*/)
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cd $R/$D
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echo "== checksums"; sha256sum -c --quiet SHA256SUMS && echo "all match"
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$PY -m pip install --quiet --no-deps --target $R/site wheels/simbracket-*-linux_x86_64.whl
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cd source
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export PYTHONPATH=$R/site:.
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$PY -c "import simbracket, simroot.pure; print('simbracket', simbracket.__file__); print('reference', simroot.pure.__file__)"
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echo "== verify_article.py"
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$PY -u verify_article.py > $R/verify.log 2>&1 || true
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echo "OK $(grep -c '^ OK' $R/verify.log) BAD $(grep -c '^ BAD' $R/verify.log)"
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grep '^ BAD' $R/verify.log || true
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grep -A6 '^Traceback' $R/verify.log || true
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tail -1 $R/verify.log
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echo "== equivalence test"
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$PY -m pytest tests/test_simbracket_equivalence.py -q -p no:cacheprovider 2>&1 | tail -1
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echo "== Appendix D from the bundled history"
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cd $R && git clone --quiet $R/$D/sim-numerics.bundle hist && cd hist
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$PY -u check_prereg_order.py | grep '^| `' > $R/appD_from_history.txt
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grep '^| `' $R/$D/source/results_prereg_order.txt > $R/appD_in_archive.txt
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if diff -q $R/appD_from_history.txt $R/appD_in_archive.txt; then echo "Appendix D reproduced from the history: identical"; else echo "Appendix D DIFFERS"; fi
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grep -c '^| `' $R/appD_from_history.txt
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echo "=== CLEANROOM DONE ==="
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